Introducing R and RStudio IDE

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Image 1 of 1: ‘rstudio default session’

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Image 1 of 1: ‘rstudio default session’

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Image 1 of 1: ‘rstudio default session’

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Image 1 of 1: ‘rstudio default session’

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Image 1 of 1: ‘rstudio default session’

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Image 1 of 1: ‘rstudio default session’

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R Basics

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Image 1 of 1: ‘rstudio script warning for space in object name’

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Introduction to the example dataset and file type

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Image 1 of 1: ‘variant calling workflow. Sequence reads (FASTQ files), Quality control (FASTQ files), Alignment to Genome (SAM/BAM files), Alignment cleanup (BAM file ready for variant calling), Variant Calling (VCF file)’

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Data Wrangling and Analyses with Tidyverse

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Image 1 of 1: ‘rstudio default session’

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Data Visualization with ggplot2

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Image 1 of 1: ‘Line plot enclosed in hexagon shape with ggplot2 typed beneath and www.rstudio.com at the bottom.’

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Getting help with R

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Image 1 of 1: ‘rstudio default session’

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Extra: R Basics continued - factors

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Extra: R Basics continued - factors and data frames

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Image 1 of 1: ‘rstudio data frame view’

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Image 1 of 1: ‘rstudio import menu’

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Image 1 of 1: ‘rstudio import screen’

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Extra: Using packages from Bioconductor

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Image 1 of 1: ‘screenshot of bioconductor homepage’

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Image 1 of 1: ‘screenshot of bioconductor search’

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